ncRNA ID | novel_egu_miR551 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr2:37015463-37015659 [-] |
Reference genome | EG5 |
Source | SRR3042544 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAAGUCAUAAUUUGAUCGCAGGAU - 24 |
Stem-loop(if miRNA) |
--        A             U           U     C    UU  UUCA  A    C      A      -            --        U   UCUGUGAU AAAUUAUGAUUUU UACAUACAAGA GUCAU AUUU  CU    GA GUUA AAAGAG GAAGGA UAUUUUUGUCAU  GAAAAAUU A   |||||||| ||||||||||||| ||||||||||| ||||| ||||  ||    || |||| |||||| |||||| ||||||||||||  ||||||||   GGACGCUA UUUAAUACUGAAA AUGUAUGUUUU UAGUA UAAA  GG    CU CAGU UUUCUU CUUCUU GUAAAAACAGUA  UUUUUUAA U UA        G             U           U     U    CU  UAUC  A    A      C      C            AA        G |
Stem-loop sequence | UCUGUGAUAAAAUUAUGAUUUUUUACAUACAAGAUGUCAUCAUUUUUCUUUCAGAAGUUACAAAGAGAGAAGGAUAUUUUUGUCAUGAAAAAUUUAUGAAUUUUUUAAAUGACAAAAAUGCUUCUUCCUUCUUUAUGACAUCCUAUGGUCAAAUUAUGAUUUUUUGUAUGUAUAAAGUCAUAAUUUGAUCGCAGGAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010916187.1 |
|
2.0 | PREDICTED: Elaeis guineensis subtilisin-like protease SBT1.5 (LOC105039875), mRNA | NA | coding protein | psRNATarget |