ncRNA ID | novel_egu_miR544 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr1:34652294-34652511 [+] |
Reference genome | EG5 |
Source | SRR3042544 |
Length | 25 |
Mature sequence(if miRNA) | 1 - ACUUUCUGUGAAUAUAUAUGACGUC - 25 |
Stem-loop(if miRNA) |
--     C        U          C       CC  A    C  CC   CA           UUU   U  --A        A    CC    --A        -A  U   ACUUU UGUGAAUA AUAUGACGUC UGAAUAA  UA AUGG UU  UAA  UCUUAUAUGAC   UUA GA   UAUAUAUG UAUU  GAAU   AUAUAUAU  AC U   ||||| |||||||| |||||||||| |||||||  || |||| ||  |||  |||||||||||   ||| ||   |||||||| ||||  ||||   ||||||||  || U   UGAAA ACACUUAU UAUACUGCAG GCUUAUU  AU UAUU AA  AUU  GGAAUAUACUG   AGU CU   GUAUAUAU AUAA  CUUG   UAUAUAUA  UG C AC     A        U          A       AU  A    A  AA   AC           --U   C  ACG        A    AU    CAG        AG  U |
Stem-loop sequence | ACUUUCUGUGAAUAUAUAUGACGUCCUGAAUAACCUAAAUGGCUUCCUAACAUCUUAUAUGACUUUUUAUGAAUAUAUAUGAUAUUCCGAAUAAUAUAUAUAACUUUCUGUGAAUAUAUAUGACGUUCUAAAUAAUAUAUAUGGCAUCCUGAUGUCAUAUAAGGCAUUAAAAAAUUAUAUAUAUUAUUCGAGACGUCAUAUUUAUUCACAAAAAGUCA |