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BaseInfo

ncRNA ID novel_egu_miR543
Species Elaeis guineensis
Class miRNA
Genome position Chr16:20532689-20532907 [-]
Reference genome EG5
Source SRR3042544;SRR3042547
Length 24
Mature sequence(if miRNA) 1 - AUAAUUUCAACGUAGGAUGUCAUA - 24
Stem-loop(if miRNA) --       -   A           A    C    UA    A           -                  A                                CAUAU
  UGGCAUC UGC UUGAAAUUAUG CUUU UGUA  GGAU UCAUAAUUUUU CAUAGGAUGUCAUAAAGA GAAAGGGUAUUUUCGUUAUUGAAAAAUUCUGA     U
  ||||||| ||| ||||||||||| |||| ||||  |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||     A
  ACUGUAG AUG AACUUUAAUAC GAAA ACAU  CCUA AGUAUUAAAAA GUAUCUUACAGUAUUUCU CUUUUCUAUAAAAGCAGUAACUUUUUAAGAUU     U
AU       G   C           G    A    GC    C           A                  C                                AAAAA
Stem-loop sequence UGGCAUCUGCAUUGAAAUUAUGACUUUCUGUAUAGGAUAUCAUAAUUUUUCAUAGGAUGUCAUAAAGAAGAAAGGGUAUUUUCGUUAUUGAAAAAUUCUGACAUAUUAUAAAAAUUAGAAUUUUUCAAUGACGAAAAUAUCUUUUCCUCUUUAUGACAUUCUAUGAAAAAAUUAUGACAUCCCGUACAAAAAGGCAUAAUUUCAACGUAGGAUGUCAUA