ncRNA ID | novel_egu_miR543 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr16:20532689-20532907 [-] |
Reference genome | EG5 |
Source | SRR3042544;SRR3042547 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUAAUUUCAACGUAGGAUGUCAUA - 24 |
Stem-loop(if miRNA) |
--       -   A           A    C    UA    A           -                  A                                CAUAU   UGGCAUC UGC UUGAAAUUAUG CUUU UGUA  GGAU UCAUAAUUUUU CAUAGGAUGUCAUAAAGA GAAAGGGUAUUUUCGUUAUUGAAAAAUUCUGA     U   ||||||| ||| ||||||||||| |||| ||||  |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||     A   ACUGUAG AUG AACUUUAAUAC GAAA ACAU  CCUA AGUAUUAAAAA GUAUCUUACAGUAUUUCU CUUUUCUAUAAAAGCAGUAACUUUUUAAGAUU     U AU       G   C           G    A    GC    C           A                  C                                AAAAA |
Stem-loop sequence | UGGCAUCUGCAUUGAAAUUAUGACUUUCUGUAUAGGAUAUCAUAAUUUUUCAUAGGAUGUCAUAAAGAAGAAAGGGUAUUUUCGUUAUUGAAAAAUUCUGACAUAUUAUAAAAAUUAGAAUUUUUCAAUGACGAAAAUAUCUUUUCCUCUUUAUGACAUUCUAUGAAAAAAUUAUGACAUCCCGUACAAAAAGGCAUAAUUUCAACGUAGGAUGUCAUA |