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BaseInfo

ncRNA ID novel_egu_miR542
Species Elaeis guineensis
Class miRNA
Genome position Chr16:2833419-2833549 [+]
Reference genome EG5
Source SRR3042544
Length 24
Mature sequence(if miRNA) 108 - UCUGAACCGUUGAUGUGGAUCCAA - 131
Stem-loop(if miRNA) -- A             A         -UAA    G  G CC   CU   C   UAUCCUU     UU
  G AUCCAUAUCAACG UUCAGAUGA    CGCA AU U  AAA  AUU AAA       AAGAU  A
  | ||||||||||||| |||||||||    |||| || |  |||  ||| |||       |||||
  C UAGGUGUAGUUGC AAGUCUACU    GCGU UA A  UUU  UAA UUU       UUUUA  U
AA C             C         CGUG    G  G CU   UU   -   ---UCUU     CC
Stem-loop sequence GAAUCCAUAUCAACGAUUCAGAUGAUAACGCAGAUGUCCAAACUAUUCAAAUAUCCUUAAGAUUUAUCCAUUUUUUCUUUUAAUUUUUUUCAGAUGUGCGGUGCUCAUCUGAACCGUUGAUGUGGAUCCAA