ncRNA ID | novel_egu_miR539 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr15:8560018-8560227 [-] |
Reference genome | EG5 |
Source | SRR3042544 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUUGAGAUAGUAGAUCACAUUCAA - 24 |
Stem-loop(if miRNA) |
--    A          C        C U     C  A                      C C        A        -AG C      UAGAUA      AUAA   GAAU UGAUCUACUA CUUAAAAU G UUGCA AU AAAAAUUAUAUAAUUUGGAAAC C UAGCUUAU CAUCAAGU   C AAAUAU      GUCUGA    A   |||| |||||||||| |||||||| | ||||| || |||||||||||||||||||||| | |||||||| ||||||||   | ||||||      ||||||    A   CUUA ACUAGAUGAU GAGUUUUA C AAUGU UG UUUUUAGUGUAUUAAACUUUUG G AUCGGAUA GUAGUUCA   G UUUAUA      UAGAUU    U AA    C          A        A U     A  G                      A A        C        CUA U      ----UA      AAGU |
Stem-loop sequence | GAAUAUGAUCUACUACCUUAAAAUCGUUUGCACAUAAAAAAUUAUAUAAUUUGGAAACCCCUAGCUUAUACAUCAAGUAGCCAAAUAUUAGAUAGUCUGAAUAAAAUUGAAUUAGAUAUAUAUUUUGAUCACUUGAUGCAUAGGCUAAGAGUUUUCAAAUUAUGUGAUUUUUGGUAUGUAAUCAAUUUUGAGAUAGUAGAUCACAUUCAA |