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BaseInfo

ncRNA ID novel_egu_miR533
Species Elaeis guineensis
Class miRNA
Genome position Chr14:3330875-3331074 [+]
Reference genome EG5
Source SRR3042544
Length 24
Mature sequence(if miRNA) 177 - GUAGUUUUGAAGUAGUAGAUCAUA - 200
Stem-loop(if miRNA) --UA        UC       C          C                 AAGAC     A                 C     --GU   -     UUCA
    AUCUACUA  UCAAAAU ACUUGCACAC AAAAAUCAUAUAAUUUA     UUCUA CUUAUGCAUCAAGUAAU AAGAA    AUA UCUAA    A
    ||||||||  ||||||| |||||||||| |||||||||||||||||     ||||| ||||||||||||||||| |||||    ||| |||||    U
    UAGAUGAU  AGUUUUG UGAACGUGUG UUUUUAGUAUAUUAAGU     GAGAU GGAUACGUAGUUUAUUA UUUUU    UGU AGAUU    U
AUAC        GA       A          U                 CUAUA     C                 U     AACU   C     UAUU
Stem-loop sequence UAAUCUACUAUCUCAAAAUCACUUGCACACCAAAAAUCAUAUAAUUUAAAGACUUCUAACUUAUGCAUCAAGUAAUCAAGAAGUAUAUCUAAUUCAAUUUUAUUUAGACUGUUCAAUUUUUUAUUAUUUGAUGCAUAGGCUAGAGAUAUCUGAAUUAUAUGAUUUUUUGUGUGCAAGUAGUUUUGAAGUAGUAGAUCAUA