ncRNA ID | novel_egu_miR533 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr14:3330875-3331074 [+] |
Reference genome | EG5 |
Source | SRR3042544 |
Length | 24 |
Mature sequence(if miRNA) | 177 - GUAGUUUUGAAGUAGUAGAUCAUA - 200 |
Stem-loop(if miRNA) |
--UA        UC       C          C                 AAGAC     A                 C     --GU   -     UUCA     AUCUACUA  UCAAAAU ACUUGCACAC AAAAAUCAUAUAAUUUA     UUCUA CUUAUGCAUCAAGUAAU AAGAA    AUA UCUAA    A     ||||||||  ||||||| |||||||||| |||||||||||||||||     ||||| ||||||||||||||||| |||||    ||| |||||    U     UAGAUGAU  AGUUUUG UGAACGUGUG UUUUUAGUAUAUUAAGU     GAGAU GGAUACGUAGUUUAUUA UUUUU    UGU AGAUU    U AUAC        GA       A          U                 CUAUA     C                 U     AACU   C     UAUU |
Stem-loop sequence | UAAUCUACUAUCUCAAAAUCACUUGCACACCAAAAAUCAUAUAAUUUAAAGACUUCUAACUUAUGCAUCAAGUAAUCAAGAAGUAUAUCUAAUUCAAUUUUAUUUAGACUGUUCAAUUUUUUAUUAUUUGAUGCAUAGGCUAGAGAUAUCUGAAUUAUAUGAUUUUUUGUGUGCAAGUAGUUUUGAAGUAGUAGAUCAUA |