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BaseInfo

ncRNA ID novel_egu_miR532
Species Elaeis guineensis
Class miRNA
Genome position Chr1:22980217-22980269 [+]
Reference genome EG5
Source SRR3042544
Length 23
Mature sequence(if miRNA) 1 - CUUUUUAAAAGCGUCGGUAGGUC - 23
Stem-loop(if miRNA) --     U          GU    CA
  CUUUU AAAAGCGUCG  AGGU  G
  ||||| ||||||||||  ||||  C
  GAAAA UUUUCGUAGC  UCUA  A
GC     C          UG    AC
Stem-loop sequence CUUUUUAAAAGCGUCGGUAGGUCAGCACAAUCUGUCGAUGCUUUUCAAAAGCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010945667.1
ncRNA:23   CUGGAUGGCUGCGAAAAUUUUUC   1
  |||||=|||||||||||||||=|
targets:367   GACCUGCCGACGCUUUUAAAAGG   389

2.5 PREDICTED: Elaeis guineensis pathogenesis-related protein PRB1-3-like (LOC105061570), mRNA NA coding protein psRNATarget