ncRNA ID | novel_egu_miR532 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr1:22980217-22980269 [+] |
Reference genome | EG5 |
Source | SRR3042544 |
Length | 23 |
Mature sequence(if miRNA) | 1 - CUUUUUAAAAGCGUCGGUAGGUC - 23 |
Stem-loop(if miRNA) |
--     U          GU    CA   CUUUU AAAAGCGUCG  AGGU  G   ||||| ||||||||||  ||||  C   GAAAA UUUUCGUAGC  UCUA  A GC     C          UG    AC |
Stem-loop sequence | CUUUUUAAAAGCGUCGGUAGGUCAGCACAAUCUGUCGAUGCUUUUCAAAAGCG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010945667.1 |
|
2.5 | PREDICTED: Elaeis guineensis pathogenesis-related protein PRB1-3-like (LOC105061570), mRNA | NA | coding protein | psRNATarget |