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BaseInfo

ncRNA ID	novel_egu_miR530
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr14:16808121-16808219 [+]
Reference genome	EG5
Source	SRR3042544
Length	20
Mature sequence(if miRNA)	80 - GGUUUAGGGUUUAGGGUUUA - 99
Stem-loop(if miRNA)	--GGG      G      G   AG     A  GA      -      G U      UUUAGG UUUAGA UUU  GAUUU GA  UUAGGG GUUAGG U U      |||||| |||||| |||  ||||| ||  |||||| |||||| |      GGAUUU GGAUUU GGG  UUGGA UU  GGUUUU CGAUUU G A AUUUG      G      G   AU     A  AG      G      G G
Stem-loop sequence	GGGUUUAGGGUUUAGAGUUUAGGAUUUAGAGAUUAGGGGUUAGGGUUUAGGGUUUAGCGUUUUGGGAUUAAGGUUUAGGGGUUUAGGGUUUAGGGUUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_010915958.2	ncRNA:20   AUUUGGGAUUUGGGAUUUGG   1   *|||=||||||||||||||| targets:215   AAAAUCCUAAACCCUAAACC   234 Target Full Sequence	1.0	PREDICTED: Elaeis guineensis pentatricopeptide repeat-containing protein At1g79490, mitochondrial (LOC105039704), mRNA	NA	coding protein	psRNATarget
GBSV01037283.1	ncRNA:20   AUUUGGGAUUUGGGAUUUGG   1   |||||*|||||||||||||| targets:119   UAAACACUAAACCCUAAACC   138 Target Full Sequence	1.0	TSA: Elaeis guineensis Unigene19119_All transcribed RNA sequence	NA	coding protein	psRNATarget
XM_010937014.2	ncRNA:20   AUUUGGGAUUUGGGAUUUGG   1   *|||||||||||||*||||| targets:63   AAAACCCUAAACCCGAAACC   82 Target Full Sequence	1.5	PREDICTED: Elaeis guineensis uncharacterized protein At5g43822 (LOC105055245), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_010908486.2	ncRNA:20   AUUUGGGAUUUGGGAUUUGG   1   **|=|||||||||||||||| targets:1655   CUAGCCCUAAACCCUAAACC   1674 Target Full Sequence	2.0	PREDICTED: Elaeis guineensis uncharacterized LOC105033611 (LOC105033611), mRNA	NA	coding protein	psRNATarget
XM_019854872.1	ncRNA:20   AUUUGGGAUUUGGGAUUUGG   1   ||||||=*|||||||||||| targets:99   UAAACCUAAAACCCUAAACC   118 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis DNA ligase 1-like (LOC105057784), mRNA	NA	coding protein	psRNATarget
GBSV01037058.1	ncRNA:20   AUUUGGGAUUUGGGAUUUGG   1   *|||||||||||||*||||* targets:292   GAAACCCUAAACCCCAAACA   311 Target Full Sequence	2.5	TSA: Elaeis guineensis Unigene18894_All transcribed RNA sequence	NA	coding protein	psRNATarget