ncRNA ID | novel_egu_miR525 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr1:16220173-16220367 [+] |
Reference genome | EG5 |
Source | SRR3042544 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGACUGAGUUUGGCCUAUUUUACA - 24 |
Stem-loop(if miRNA) |
--      A   U           CAU              CU     -      UG CCU         A     A         C      GA AAA   AGACUG GUU GGCCUAUUUUA   CUGUCCAGGAUCAC  UUUUG GUGGGC  G   GAAUCCUAU GGGAG AAAAAAUGA CUGUUG  G   A   |||||| ||| |||||||||||   ||||||||||||||  ||||| ||||||  |   ||||||||| ||||| ||||||||| ||||||  |   A   UCUGAC CGA CCGGAUAAAAU   GACAGGUUCUGGUG  AAAAC CACCCG  C   CUUAGGGUA CCCUC UUUUUUACU GACAAC  C   A UA      A   C           AUU              -U     A      GU --U         C     C         A      UC AGA |
Stem-loop sequence | AGACUGAGUUUGGCCUAUUUUACAUCUGUCCAGGAUCACCUUUUUGGUGGGCUGGCCUGAAUCCUAUAGGGAGAAAAAAAUGACCUGUUGGAGAAAAAAAGACCUCAACAGAUCAUUUUUUCCUCCCCAUGGGAUUCUCUGGCCCACACAAAAUGUGGUCUUGGACAGUUAUAAAAUAGGCCCAGCACAGUCUAU |