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BaseInfo

ncRNA ID novel_egu_miR525
Species Elaeis guineensis
Class miRNA
Genome position Chr1:16220173-16220367 [+]
Reference genome EG5
Source SRR3042544
Length 24
Mature sequence(if miRNA) 1 - AGACUGAGUUUGGCCUAUUUUACA - 24
Stem-loop(if miRNA) --      A   U           CAU              CU     -      UG CCU         A     A         C      GA AAA
  AGACUG GUU GGCCUAUUUUA   CUGUCCAGGAUCAC  UUUUG GUGGGC  G   GAAUCCUAU GGGAG AAAAAAUGA CUGUUG  G   A
  |||||| ||| |||||||||||   ||||||||||||||  ||||| ||||||  |   ||||||||| ||||| ||||||||| ||||||  |   A
  UCUGAC CGA CCGGAUAAAAU   GACAGGUUCUGGUG  AAAAC CACCCG  C   CUUAGGGUA CCCUC UUUUUUACU GACAAC  C   A
UA      A   C           AUU              -U     A      GU --U         C     C         A      UC AGA
Stem-loop sequence AGACUGAGUUUGGCCUAUUUUACAUCUGUCCAGGAUCACCUUUUUGGUGGGCUGGCCUGAAUCCUAUAGGGAGAAAAAAAUGACCUGUUGGAGAAAAAAAGACCUCAACAGAUCAUUUUUUCCUCCCCAUGGGAUUCUCUGGCCCACACAAAAUGUGGUCUUGGACAGUUAUAAAAUAGGCCCAGCACAGUCUAU