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BaseInfo

ncRNA ID novel_egu_miR521
Species Elaeis guineensis
Class miRNA
Genome position Chr12:16614858-16615014 [-]
Reference genome EG5
Source SRR3042544
Length 24
Mature sequence(if miRNA) 1 - AUAGAAGACAUGUAUUGCAAUAUU - 24
Stem-loop(if miRNA) --        C      G      C    C    UUUUG      --U       -  U      UG        -    AA
  UAUUGCAA ACAUGU CUUCUA AUCG AGAG     UCGAUA   UUUCGAU CA GUUCUC  GAUACAUA GCAU  C
  |||||||| |||||| |||||| |||| ||||     ||||||   ||||||| || ||||||  |||||||| ||||  U
  AUAACGUU UGUACA GAAGAU UAGU UCUU     AGCUGU   AAAGCUA GU CAAGAG  CUAUGUGU CGUA  U
UU        A      -      A    U    --UAA      CGU       C  -      GU        U    AU
Stem-loop sequence UAUUGCAACACAUGUGCUUCUACAUCGCAGAGUUUUGUCGAUAUUUUCGAUCAUGUUCUCUGGAUACAUAGCAUAACUUUAAUGCUUGUGUAUCUGGAGAACUGCAUCGAAAUGCUGUCGAAAUUUCUUUGAUAUAGAAGACAUGUAUUGCAAUAUU