ncRNA ID | novel_egu_miR520 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr12:22641592-22641733 [-] |
Reference genome | EG5 |
Source | SRR3042544 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGGACUCUCGCUUAUAAGGAGGAA - 24 |
Stem-loop(if miRNA) |
--           A  C GA    CG                      C               CAUUAUU   CCUCCUUAUAA CG G  UCCU  UUGACUUACAAUCGAUGUGGGA UAUUGGUGCCCUCCA       A   ||||||||||| || |  ||||  |||||||||||||||||||||| |||||||||||||||   GGAGGAAUAUU GC C  AGGA  AACUGAGUGUUAGCUACACCCU AUAACCACGGGAGGU       C AA           C  U UC    AU                      A               AUACCAA |
Stem-loop sequence | CCUCCUUAUAAACGCGGAUCCUCGUUGACUUACAAUCGAUGUGGGACUAUUGGUGCCCUCCACAUUAUUACAACCAUAUGGAGGGCACCAAUAAUCCCACAUCGAUUGUGAGUCAAUAAGGACUCUCGCUUAUAAGGAGGAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010939114.2 |
|
2.0 | PREDICTED: Elaeis guineensis 7-deoxyloganetin glucosyltransferase-like (LOC105056801), mRNA | NA | coding protein | psRNATarget |