ncRNA ID | novel_egu_miR519 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr12:24563310-24563458 [-] |
Reference genome | EG5 |
Source | SRR3042544 |
Length | 24 |
Mature sequence(if miRNA) | 126 - UUUUGAAUGACGAAAAUACUCCUA - 149 |
Stem-loop(if miRNA) |
-- ACUC UA -- -------------CU AAAAAGUCAUA UUUUGAAUGACGAAAAU C UUCUUU AAAAAAUUAUGAUAUC ACGUCC A ||||||||||||||||| | |||||| |||||||||||||||| |||||| AAAACUUACUGCUUUUA G AAGAAA UUUUUUAAUACUGUAG UGUAGG U UU AAAA UC CU AAUACAAUAUAAUAC AUAUCUAUUUU |
Stem-loop sequence | UUUUGAAUGACGAAAAUACUCCUAUUCUUUAAAAAAUUAUGAUAUCCUACGUCCAAAAAGUCAUAAUUUUUAUCUAUAGGAUGUCAUAAUAUAACAUAAGAUGUCAUAAUUUUUUUCAAAGAACUGAAAAAUUUUCGUCAUUCAAAAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_019853582.1 |
|
2.5 | PREDICTED: Elaeis guineensis rop guanine nucleotide exchange factor 14 (LOC105053520), transcript variant X2, mRNA | NA | coding protein | psRNATarget |