ncRNA ID | novel_egu_miR518 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr12:2400338-2400434 [+] |
Reference genome | EG5 |
Source | SRR3042544 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACUUGACAAGUACUUGACUGCACC - 24 |
Stem-loop(if miRNA) |
--     A      C  G    CACCUAUAAAUCUUCUAUCACUAAAUUAAAAAUUCA  UAAUCCA   ACUUG CAAGUA UU ACUG                                    GG       A   ||||| |||||| || ||||                                    ||   UGAAC GUUCGU GA UGAC                                    AU       U AC     -      U  G    ------------------------------------  GAAAUCA |
Stem-loop sequence | ACUUGACAAGUACUUGACUGCACCUAUAAAUCUUCUAUCACUAAAUUAAAAAUUCAGGUAAUCCAAUACUAAAGUACAGUGAGUUGCUUGCAAGUCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GBSV01018279.1 |
|
3.0 | TSA: Elaeis guineensis Unigene107_All transcribed RNA sequence | NA | coding protein | psRNATarget |