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BaseInfo

ncRNA ID novel_egu_miR517
Species Elaeis guineensis
Class miRNA
Genome position Chr12:28630908-28630955 [-]
Reference genome EG5
Source SRR3042544
Length 21
Mature sequence(if miRNA) 28 - GCCGCAUGCGGCUGUCAGGAC - 48
Stem-loop(if miRNA) --    CA            GA  G
  GCCG  UGCGGCUGUCAG  CU A
  ||||  ||||||||||||  ||
  CGGC  AUGUCGGCGGUC  GA C
AG    --            UC  A
Stem-loop sequence GCCGCAUGCGGCUGUCAGGACUGACAAGCUCUGGCGGCUGUACGGCGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01039846.1
ncRNA:21   CAGGACUGUCGGCGUACGCCG   1
  |||||||||||||||||||||
targets:3   GUCCUGACAGCCGCAUGCGGC   23

0.0 TSA: Elaeis guineensis Unigene21684_All transcribed RNA sequence NA coding protein psRNATarget