Search result

BaseInfo

ncRNA ID novel_egu_miR515
Species Elaeis guineensis
Class miRNA
Genome position Chr1:22560416-22560462 [-]
Reference genome EG5
Source SRR3042544
Length 24
Mature sequence(if miRNA) 1 - AGUCUCUGACAGUAGUAUGGCGAU - 24
Stem-loop(if miRNA) --   -    CG       -   U
  CGC AUAC  UUGUCAG GAC G
  ||| ||||  ||||||| ||| A
  GCG UAUG  GACAGUC CUG C
UA   G    AU       U   A
Stem-loop sequence CGCAUACCGUUGUCAGGACUGACAGUCUCUGACAGUAGUAUGGCGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01017553.1
ncRNA:24   UAGCGGUAUGAUGACAGUCUCUGA   1
  ||||=|=||||||||*||||||||
targets:434   AUCGUCGUACUACUGCCAGAGACU   457

2.5 TSA: Elaeis guineensis CL6671.Contig2_All transcribed RNA sequence NA coding protein psRNATarget