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BaseInfo

ncRNA ID novel_egu_miR512
Species Elaeis guineensis
Class miRNA
Genome position Chr12:17868292-17868483 [+]
Reference genome EG5
Source SRR3042544
Length 24
Mature sequence(if miRNA) 169 - ACGAAAAAACCGACCUGCAGGCAU - 192
Stem-loop(if miRNA) --       A    A       A   A         U    A           C      ---             CAUUUCAU          -C   AU
  GUCUGCA GUUG UUUUUUC UUU AAAAUUUUG AUGA GAAAAUAUCUC GUUUUU   AAAAAAAUUAUGA        GUCUAUAUUA  GAC  C
  ||||||| |||| ||||||| ||| ||||||||| |||| ||||||||||| ||||||   |||||||||||||        ||||||||||  |||  C
  CGGACGU CAGC AAAAAAG AAA UUUUAAAAC UACU UUUUUAUAGAG CAAGAA   UUUUUUUAAUGCU        UAGGUAUAAU  CUG  U
UA       C    C       C   C         U    A           A      AUC             -------C          AC   CG
Stem-loop sequence GUCUGCAAGUUGAUUUUUUCAUUUAAAAAUUUUGUAUGAAGAAAAUAUCUCCGUUUUUAAAAAAAUUAUGACAUUUCAUGUCUAUAUUACGACAUCCUGCGUCCAUAAUAUGGAUCUCGUAAUUUUUUUCUAAAGAACAGAGAUAUUUUUAUCAUUCAAAAUUUUCAAACGAAAAAACCGACCUGCAGGCAU