ncRNA ID | novel_egu_miR506 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr10:11988063-11988138 [+] |
Reference genome | EG5 |
Source | SRR3042544;SRR3042542 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGAGAGAAUGUAGAGAGAGGAGAG - 24 |
Stem-loop(if miRNA) |
A       UGU                   --      A  GAGAGAA   AGAGAGAGGAGAGAGGAGA  AAGGGA A  |||||||   |||||||||||||||||||  ||||||  UUUUUUU   UCUUUUUCUUUUCUUUUCU  UUUUCU A -       -UU                   AU      C |
Stem-loop sequence | AGAGAGAAUGUAGAGAGAGGAGAGAGGAGAAAGGGAAAACUCUUUUUAUCUUUUCUUUUCUUUUUCUUUUUUUUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GBSV01012019.1 |
|
1.5 | TSA: Elaeis guineensis CL4310.Contig2_All transcribed RNA sequence | NA | coding protein | psRNATarget | |||||||||
GBSV01011013.1 |
|
3.0 | TSA: Elaeis guineensis CL3922.Contig2_All transcribed RNA sequence | NA | coding protein | psRNATarget |