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BaseInfo

ncRNA ID	novel_egu_miR505
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr1:38280441-38280582 [-]
Reference genome	EG5
Source	SRR3042544
Length	24
Mature sequence(if miRNA)	1 - AGUAUUUUCGUCAUAUAAAAUUUU - 24
Stem-loop(if miRNA)	--       A             CU         A            A   C     --       UG -      AAUUUUG AUGAUGAAAAUAC  CUAUUUUUU GAAAAAAUUAUG CAU UUGUA  CAUAUUA  G AUCC   ||||||| |||||||||||||  ||||||||| |||||||||||| ||| |||||  |||||||  | |||G   UUAAAAU UACUGCUUUUAUG  GAUAGAAAA CUUUUUUAAUAU GUA AAUAU  GUAUAAU  U UAGG UU       A             AG         -            -   A     AG       GU A
Stem-loop sequence	AAUUUUGAAUGAUGAAAAUACCUCUAUUUUUUAGAAAAAAUUAUGACAUCUUGUACAUAUUAUGGAUCCGGGAUAUUGUAAUAUGGAUAUAAAAUGUAUAAUUUUUUCAAAAGAUAGGAGUAUUUUCGUCAUAUAAAAUUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_010916187.1	ncRNA:24   UUUUAAAAUAUACUGCUUUUAUGA   1   ||||||||=*|||||||||||||| targets:620   AAAAUUUUGAAUGACGAAAAUACU   643 Target Full Sequence	2.0	PREDICTED: Elaeis guineensis subtilisin-like protease SBT1.5 (LOC105039875), mRNA	NA	coding protein	psRNATarget
JO089323.1	ncRNA:24   UUUUAAAAUAUACUGCUUUUAUGA   1   ***|||||=|||||||||||||=| targets:791   UUCAUUUUGUAUGACGAAAAUAUU   814 Target Full Sequence	2.5	TSA: Elaeis guineensis isotig02071.Elguifruit mRNA sequence	NA	coding protein	psRNATarget
XM_010938341.2	ncRNA:24   UUUUAAAAUAUACUGCUUUUAUGA   1   ***|||||=|||||||||||||=| targets:1659   UUCAUUUUGUAUGACGAAAAUAUU   1682 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis ribose-phosphate pyrophosphokinase 4 (LOC105056221), transcript variant X1, mRNA	NA	coding protein	psRNATarget