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BaseInfo

ncRNA ID novel_egu_miR498
Species Elaeis guineensis
Class miRNA
Genome position Chr1:53411430-53411482 [-]
Reference genome EG5
Source SRR3042544
Length 24
Mature sequence(if miRNA) 1 - AAGGACUCUUAUCAAUGAUACGUC - 24
Stem-loop(if miRNA) ---U     GA         U     A
    UAUCA  GAUAAGAGU CCUUC A
    |||||  ||||||||| ||||| A
    AUAGU  CUAUUCUCA GGAAG C
CUGC     AA         -     A
Stem-loop sequence UUAUCAGAGAUAAGAGUUCCUUCAAACAGAAGGACUCUUAUCAAUGAUACGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010936354.2
ncRNA:24   CUGCAUAGUAACUAUUCUCAGGAA   1
  ||*|*||||*||*|||||||||||
targets:340   GAGGCAUCAAUGUUAAGAGUCCUU   363

2.5 PREDICTED: Elaeis guineensis putative peroxisomal acyl-coenzyme A oxidase 1.2 (LOC105054765), transcript variant X1, mRNA NA coding protein psRNATarget