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BaseInfo

ncRNA ID novel_egu_miR494
Species Elaeis guineensis
Class miRNA
Genome position Chr6:43191926-43192089 [-]
Reference genome EG5
Source SRR3042542;SRR3042548
Length 24
Mature sequence(if miRNA) 141 - AGAAACUGGAGAGAGAAGGUAGAG - 164
Stem-loop(if miRNA) ------------------     CU            U                  A          -                       A
                  AGAAA  GGAGAGAGAAGG AGAGAGAGGAGAGAGAAA GAGGAAGAGA AAGGAAAGAGAGGAGAGAGAGAA A
                  |||||  |||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||
                  UCUUU  UCUUUUUCUUUU UCUUUUUCUUUUCUUUUU CUUUUUCUUU UUUCUUUUUUUUUUCUUUCUCUU U
UUUCUUUUCUUUUCUUUU     -U            -                  -          C                       U
Stem-loop sequence AGAAACUGGAGAGAGAAGGUAGAGAGAGGAGAGAGAAAAGAGGAAGAGAAAGGAAAGAGAGGAGAGAGAGAAAAUUUUCUCUUUCUUUUUUUUUUCUUUCUUUCUUUUUCUUUUUCUUUUCUUUUUCUUUUUCUUUUUCUUUUUCUUUUUCUUUUCUUUUCUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_019854012.1
ncRNA:24   GAGAUGGAAGAGAGAGGUCAAAGA   1
  *||**|||||||||||=||||||*
targets:2251   GUCAUCCUUCUCUCUCUAGUUUCC   2274

2.5 PREDICTED: Elaeis guineensis uncharacterized LOC105055185 (LOC105055185), mRNA NA coding protein psRNATarget