ncRNA ID | novel_egu_miR494 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr6:43191926-43192089 [-] |
Reference genome | EG5 |
Source | SRR3042542;SRR3042548 |
Length | 24 |
Mature sequence(if miRNA) | 141 - AGAAACUGGAGAGAGAAGGUAGAG - 164 |
Stem-loop(if miRNA) |
------------------     CU            U                  A          -                       A                   AGAAA  GGAGAGAGAAGG AGAGAGAGGAGAGAGAAA GAGGAAGAGA AAGGAAAGAGAGGAGAGAGAGAA A                   |||||  |||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||                   UCUUU  UCUUUUUCUUUU UCUUUUUCUUUUCUUUUU CUUUUUCUUU UUUCUUUUUUUUUUCUUUCUCUU U UUUCUUUUCUUUUCUUUU     -U            -                  -          C                       U |
Stem-loop sequence | AGAAACUGGAGAGAGAAGGUAGAGAGAGGAGAGAGAAAAGAGGAAGAGAAAGGAAAGAGAGGAGAGAGAGAAAAUUUUCUCUUUCUUUUUUUUUUCUUUCUUUCUUUUUCUUUUUCUUUUCUUUUUCUUUUUCUUUUUCUUUUUCUUUUUCUUUUCUUUUCUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_019854012.1 |
|
2.5 | PREDICTED: Elaeis guineensis uncharacterized LOC105055185 (LOC105055185), mRNA | NA | coding protein | psRNATarget |