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BaseInfo

ncRNA ID novel_egu_miR491
Species Elaeis guineensis
Class miRNA
Genome position Chr11:23128451-23128523 [+]
Reference genome EG5
Source SRR3042544
Length 24
Mature sequence(if miRNA) 1 - AAGCUUUGGAGGGGUAGCGUGCUG - 24
Stem-loop(if miRNA) --A      G      U  CG    GGA   A    UA
   AGCUUU GAGGGG AG  UGCU   AUC GAGC  G
   |||||| |||||| ||  ||||   ||| ||||
   UUGAAG CUUCUU UC  ACGG   UGG CUUG  C
GUG      G      -  AU    -AG   -    UU
Stem-loop sequence AAGCUUUGGAGGGGUAGCGUGCUGGAAUCAGAGCUAGCUUGUUCGGUGAGGCAUACUUUCUUCGGAAGUUGUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010912424.1
ncRNA:24   GUCGUGCGAUGGGGAGGUUUCGAA   1
  *|||-||||*|*||||||||||||
targets:366   GAGC-CGCUUCGCCUCCAAAGCUU   388

2.5 PREDICTED: Elaeis guineensis uncharacterized LOC105036677 (LOC105036677), partial mRNA NA coding protein psRNATarget
XM_010912538.1
ncRNA:24   GUCGUGCGAUGGGGAGGUUUCGAA   1
  *|||-||||*|*||||||||||||
targets:371   GAGC-CGCUUCGCCUCCAAAGCUU   393

2.5 PREDICTED: Elaeis guineensis uncharacterized LOC105036803 (LOC105036803), partial mRNA NA coding protein psRNATarget
XM_010928578.1
ncRNA:24   GUCGUGCGAUGGGGAGGUUUCGAA   1
  *|||-||||*|*||||||||||||
targets:185   GAGC-CGCUUCGCCUCCAAAGCUU   207

2.5 PREDICTED: Elaeis guineensis pre-rRNA-processing protein TSR1 homolog (LOC105049042), mRNA NA coding protein psRNATarget