ncRNA ID | novel_egu_miR491 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr11:23128451-23128523 [+] |
Reference genome | EG5 |
Source | SRR3042544 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAGCUUUGGAGGGGUAGCGUGCUG - 24 |
Stem-loop(if miRNA) |
--A      G      U  CG    GGA   A    UA    AGCUUU GAGGGG AG  UGCU   AUC GAGC  G    |||||| |||||| ||  ||||   ||| ||||    UUGAAG CUUCUU UC  ACGG   UGG CUUG  C GUG      G      -  AU    -AG   -    UU |
Stem-loop sequence | AAGCUUUGGAGGGGUAGCGUGCUGGAAUCAGAGCUAGCUUGUUCGGUGAGGCAUACUUUCUUCGGAAGUUGUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010912424.1 |
|
2.5 | PREDICTED: Elaeis guineensis uncharacterized LOC105036677 (LOC105036677), partial mRNA | NA | coding protein | psRNATarget | |||||||||
XM_010912538.1 |
|
2.5 | PREDICTED: Elaeis guineensis uncharacterized LOC105036803 (LOC105036803), partial mRNA | NA | coding protein | psRNATarget | |||||||||
XM_010928578.1 |
|
2.5 | PREDICTED: Elaeis guineensis pre-rRNA-processing protein TSR1 homolog (LOC105049042), mRNA | NA | coding protein | psRNATarget |