ncRNA ID | novel_egu_miR489 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr1:65043568-65043626 [+] |
Reference genome | EG5 |
Source | SRR3042544 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGGACAACAACGUUUAUCGAGCAU - 24 |
Stem-loop(if miRNA) |
--        -   G U   C A     G U   AGGACAAC AAC U UAU G GCAUA G C   |||||||| ||| | ||| | ||||| |   UCCUGUUG UUG G AUA C CGUGU U G AC        G   G U   - -     G U |
Stem-loop sequence | AGGACAACAACGUUUAUCGAGCAUAGGUCGUUGUGUGCCAUAUGGGUUGGUUGUCCUCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GBSV01010704.1 |
|
1.0 | TSA: Elaeis guineensis CL3797.Contig2_All transcribed RNA sequence | NA | coding protein | psRNATarget | |||||||||
GBSV01010703.1 |
|
1.5 | TSA: Elaeis guineensis CL3797.Contig1_All transcribed RNA sequence | NA | coding protein | psRNATarget |