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BaseInfo

ncRNA ID novel_egu_miR484
Species Elaeis guineensis
Class miRNA
Genome position Chr9:37795500-37795556 [+]
Reference genome EG5
Source SRR3042544
Length 24
Mature sequence(if miRNA) 1 - UGCUUUUUAAAAGCGUCGGCAGGU - 24
Stem-loop(if miRNA) --        AA              CA
  UGCUUUUU  AAGCGUCGGCAGGU  G
  ||||||||  ||||||||||||||  C
  ACGAAAAA  UUCGCAGCCGUCCA  G
CU        CC              AC
Stem-loop sequence UGCUUUUUAAAAGCGUCGGCAGGUCAGCGCAACCUGCCGACGCUUCCAAAAAGCAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010945667.1
ncRNA:24   UGGACGGCUGCGAAAAUUUUUCGU   1
  ||||||||||||||||||||=||=
targets:368   ACCUGCCGACGCUUUUAAAAGGCG   391

2.5 PREDICTED: Elaeis guineensis pathogenesis-related protein PRB1-3-like (LOC105061570), mRNA NA coding protein psRNATarget