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BaseInfo

ncRNA ID	novel_egu_miR480
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr9:3453559-3453666 [-]
Reference genome	EG5
Source	SRR3042544;SRR3042547
Length	19
Mature sequence(if miRNA)	1 - GGCAGUCUCCUUGGCUAGC - 19
Stem-loop(if miRNA)	--          U    U      -    U UUC        A  G    UUCA     UAGCCAAGGA GACU GCCUAU AAUU C   AAGAUCUC GU AUGC    GGC   |||||||||| |||| |||||| |||| |   |||||||| || ||||    ||C   AUCGGUUCCU CUGA CGGAUA UUAG G   UUCUAGAG UA UACG    CCA CG          -    -      C    U UGC        C  G    --UA
Stem-loop sequence	UAGCCAAGGAUGACUUGCCUAUAAUUUCUUCAAGAUCUCAGUGAUGCUUCAGGCCACCAUGCAUGAUCGAGAUCUUCGUGUGAUUCAUAGGCAGUCUCCUUGGCUAGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
GBSV01017572.1	ncRNA:19   CGAUCGGUUCCUCUGACGG   1   ||*|*|||||||||||||= targets:158   GCCAUCCAAGGAGACUGCU   176 Target Full Sequence	3.0	TSA: Elaeis guineensis CL6680.Contig2_All transcribed RNA sequence	NA	coding protein	psRNATarget
XM_010937653.2	ncRNA:19   CGAUCGGUUCCUCUGACGG   1   ||*|*|||||||||||||= targets:1860   GCCAUCCAAGGAGACUGCU   1878 Target Full Sequence	3.0	PREDICTED: Elaeis guineensis casein kinase 1-like (LOC105055713), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_010937652.2	ncRNA:19   CGAUCGGUUCCUCUGACGG   1   ||*|*|||||||||||||= targets:1971   GCCAUCCAAGGAGACUGCU   1989 Target Full Sequence	3.0	PREDICTED: Elaeis guineensis casein kinase 1-like (LOC105055713), transcript variant X1, mRNA	NA	coding protein	psRNATarget