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BaseInfo

ncRNA ID novel_egu_miR479
Species Elaeis guineensis
Class miRNA
Genome position Chr9:5502374-5502576 [-]
Reference genome EG5
Source SRR3042544;SRR3042545;SRR3042542
Length 24
Mature sequence(if miRNA) 1 - AAUUUGAUCAUAGGAUGUUAUAAU - 24
Stem-loop(if miRNA) --            CA          G    CU  UU    AUUU        GAUGUUAUAAGAAAAG    -- G UAUUUUUGUCAUUUAAAAAUUUUAUAAAUUU
  UAUAACAUCCUG  GUCAAAUUAU AUUU  UG  CAUA    AGUUAUAG                GAAG  A A                               U
  ||||||||||||  |||||||||| ||||  ||  ||||    ||||||||                ||||  | |                               U
  AUAUUGUAGGAU  UAGUUUAAUA UAAA  AU  GUAU    UCAGUAUU                AGAG  A U                               A
UA            AC          A    AC  GC    -AUU        ------------AAAA    GU - UUAGUGUUUCUGACUUCUUGUAAAAGUAGUA
Stem-loop sequence UAUAACAUCCUGCAGUCAAAUUAUGAUUUCUUGUUCAUAAUUUAGUUAUAGGAUGUUAUAAGAAAAGGAAGAGAUAUUUUUGUCAUUUAAAAAUUUUAUAAAUUUUUAAUGAUGAAAAUGUUCUUCAGUCUUUGUGAUUUAUGGAGAAAAAUUAUGACUUUAUAUGCGUACAAAAUAAUAAUUUGAUCAUAGGAUGUUAUAAU