ncRNA ID | novel_egu_miR479 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr9:5502374-5502576 [-] |
Reference genome | EG5 |
Source | SRR3042544;SRR3042545;SRR3042542 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUUUGAUCAUAGGAUGUUAUAAU - 24 |
Stem-loop(if miRNA) |
--            CA          G    CU  UU    AUUU        GAUGUUAUAAGAAAAG    -- G UAUUUUUGUCAUUUAAAAAUUUUAUAAAUUU   UAUAACAUCCUG  GUCAAAUUAU AUUU  UG  CAUA    AGUUAUAG                GAAG  A A                               U   ||||||||||||  |||||||||| ||||  ||  ||||    ||||||||                ||||  | |                               U   AUAUUGUAGGAU  UAGUUUAAUA UAAA  AU  GUAU    UCAGUAUU                AGAG  A U                               A UA            AC          A    AC  GC    -AUU        ------------AAAA    GU - UUAGUGUUUCUGACUUCUUGUAAAAGUAGUA |
Stem-loop sequence | UAUAACAUCCUGCAGUCAAAUUAUGAUUUCUUGUUCAUAAUUUAGUUAUAGGAUGUUAUAAGAAAAGGAAGAGAUAUUUUUGUCAUUUAAAAAUUUUAUAAAUUUUUAAUGAUGAAAAUGUUCUUCAGUCUUUGUGAUUUAUGGAGAAAAAUUAUGACUUUAUAUGCGUACAAAAUAAUAAUUUGAUCAUAGGAUGUUAUAAU |