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BaseInfo

ncRNA ID	novel_egu_miR477
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr8:40187196-40187337 [+]
Reference genome	EG5
Source	SRR3042544;SRR3042542
Length	20
Mature sequence(if miRNA)	1 - UUUAGGGUUUAGGGUUUUUU - 20
Stem-loop(if miRNA)	--                  UUA      UUG      AG     AG             A               UUUAGGGUUUAGGGUUUU   GGAUUU   GGGUUU  GAUUU  GAUUUUAGGGUUU GAAUUUUAAGUUU   ||||||||||||||||||   ||||||   ||||||  |||||  ||||||||||||| ||||||||||||G   GGAUUUCAGAUUUUAGGA   UCUGAG   UUUAAG  UUGGG  UUAGGAUUUUAGA UUUAGGAUUUAGG UG                  ---      --A      AU     AU             A
Stem-loop sequence	UUUAGGGUUUAGGGUUUUUUAGGAUUUUUGGGGUUUAGGAUUUAGGAUUUUAGGGUUUAGAAUUUUAAGUUUGGGAUUUAGGAUUUAAGAUUUUAGGAUUUAGGGUUUAGAAUUUAGAGUCUAGGAUUUUAGACUUUAGGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_010915958.2	ncRNA:20   UUUUUUGGGAUUUGGGAUUU   1   *=||||=||||||||||||| targets:213   CGAAAAUCCUAAACCCUAAA   232 Target Full Sequence	2.0	PREDICTED: Elaeis guineensis pentatricopeptide repeat-containing protein At1g79490, mitochondrial (LOC105039704), mRNA	NA	coding protein	psRNATarget
XM_010907125.2	ncRNA:20   UUUUUUGGGAUUUGGGAUUU   1   *|=||||||||||||||||* targets:50   UAGAAACCCUAAACCCUAAC   69 Target Full Sequence	2.0	PREDICTED: Elaeis guineensis U3 snoRNP-associated protein-like YAOH (LOC105032630), mRNA	NA	coding protein	psRNATarget
GBSV01040569.1	ncRNA:20   UUUUUUGGGAUUUGGGAUUU   1   ==||||||||||||||||=| targets:8   GGAAAACCCUAAACCCUAGA   27 Target Full Sequence	2.5	TSA: Elaeis guineensis Unigene22408_All transcribed RNA sequence	NA	coding protein	psRNATarget
XM_010926553.2	ncRNA:20   UUUUUUGGGAUUUGGGAUUU   1   ||||||||||||||||||** targets:56   AAAAAACCCUAAACCCUAUC   75 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis DEAD-box ATP-dependent RNA helicase 31 (LOC105047574), mRNA	NA	coding protein	psRNATarget
JO090441.1	ncRNA:20   UUUUUUGGGAUUUGGGAUUU   1   ||||||*||||||*|||||| targets:243   AAAAAAACCUAAAACCUAAA   262 Target Full Sequence	2.5	TSA: Elaeis guineensis isotig03187.Elguifruit mRNA sequence	NA	coding protein	psRNATarget
GBSV01028210.1	ncRNA:20   UUUUUUGGGAUUUGGGAUUU   1   ||||||*||||||*|||||| targets:369   AAAAAAACCUAAAACCUAAA   388 Target Full Sequence	2.5	TSA: Elaeis guineensis Unigene10043_All transcribed RNA sequence	NA	coding protein	psRNATarget
XM_010914482.2	ncRNA:20   UUUUUUGGGAUUUGGGAUUU   1   *|||||||||||||||*||* targets:52   CAAAAACCCUAAACCCCAAC   71 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis probable diaminopimelate decarboxylase, chloroplastic (LOC105038619), mRNA	NA	coding protein	psRNATarget
XM_010937014.2	ncRNA:20   UUUUUUGGGAUUUGGGAUUU   1   **||||||||||||||*||| targets:61   CUAAAACCCUAAACCCGAAA   80 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis uncharacterized protein At5g43822 (LOC105055245), transcript variant X3, mRNA	NA	coding protein	psRNATarget
GBSV01042637.1	ncRNA:20   UUUUUUGGGAUUUGGGAUUU   1   *|||||||||||||||*||* targets:55   CAAAAACCCUAAACCCCAAC   74 Target Full Sequence	2.5	TSA: Elaeis guineensis Unigene24477_All transcribed RNA sequence	NA	coding protein	psRNATarget
XM_010917149.2	ncRNA:20   UUUUUUGGGAUUUGGGAUUU   1   **=||||||||||||||||= targets:226   CCGAAACCCUAAACCCUAAG   245 Target Full Sequence	3.0	PREDICTED: Elaeis guineensis serine/threonine-protein phosphatase 5 (LOC105040568), mRNA	NA	coding protein	psRNATarget
XM_010907784.2	ncRNA:20   UUUUUUGGGAUUUGGGAUUU   1   **=||||||||||||||||* targets:348   UCGAAACCCUAAACCCUAAC   367 Target Full Sequence	3.0	PREDICTED: Elaeis guineensis protein DETOXIFICATION 42-like (LOC105033120), transcript variant X2, mRNA	NA	coding protein	psRNATarget
GBSV01021929.1	ncRNA:20   UUUUUUGGGAUUUGGGAUUU   1   ***||||||||||||||||* targets:253   CCCAAACCCUAAACCCUAAC   272 Target Full Sequence	3.0	TSA: Elaeis guineensis Unigene3757_All transcribed RNA sequence	NA	coding protein	psRNATarget