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BaseInfo

ncRNA ID novel_egu_miR474
Species Elaeis guineensis
Class miRNA
Genome position Chr8:4406286-4406372 [-]
Reference genome EG5
Source SRR3042544
Length 21
Mature sequence(if miRNA) 67 - UUUACGGAGAGAAUUGAGGAC - 87
Stem-loop(if miRNA) --                      -   -   UUGCUUA     A
  UUUACGGAGAGAAUUGAGGACU UGG GGA       UCAGA A
  |||||||||||||||||||||| ||| |||       |||||
  AAAUGCCUCUCUUAACUCCUGA ACC CCU       AGUCU U
AG                      U   U   -CCUUAG     C
Stem-loop sequence UUUACGGAGAGAAUUGAGGACUUGGGGAUUGCUUAUCAGAAAUCUCUGAGAUUCCUCCUCCAUAGUCCUCAAUUCUCUCCGUAAAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010928467.2
ncRNA:21   CAGGAGUUAAGAGAGGCAUUU   1
  *||*||||||||||||||||*
targets:445   CUCGUCAAUUCUCUCCGUAAU   465

2.0 PREDICTED: Elaeis guineensis adenylyltransferase and sulfurtransferase MOCS3-2 (LOC105048961), transcript variant X1, mRNA NA coding protein psRNATarget
XM_010928485.2
ncRNA:21   CAGGAGUUAAGAGAGGCAUUU   1
  *||*||||||||||||||||*
targets:443   CUCGUCAAUUCUCUCCGUAAU   463

2.0 PREDICTED: Elaeis guineensis adenylyltransferase and sulfurtransferase MOCS3-2 (LOC105048961), transcript variant X3, mRNA NA coding protein psRNATarget
XM_010928476.2
ncRNA:21   CAGGAGUUAAGAGAGGCAUUU   1
  *||*||||||||||||||||*
targets:427   CUCGUCAAUUCUCUCCGUAAU   447

2.0 PREDICTED: Elaeis guineensis adenylyltransferase and sulfurtransferase MOCS3-2 (LOC105048961), transcript variant X2, mRNA NA coding protein psRNATarget