ncRNA ID | novel_egu_miR472 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr8:22286553-22286659 [-] |
Reference genome | EG5 |
Source | SRR3042544 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UGAUAUUUUGUAGGGUUUGAGGAU - 24 |
Stem-loop(if miRNA) |
--   UG  -AA   GG   U      ----AA  UGUAGCAGUGUGAGUUAGUCU   UCU  AG   UAU  GAU UUAUGC      GU                     C   |||  ||   |||  ||| ||||||      ||   GGA  UU   AUG  UUA AGUACG      CU                     U UA   GU  GGG   UU   U      AAGGUG  CUAAUUCGAGAGUUUUGGAGU |
Stem-loop sequence | UCUUGAGAAUAUGGGAUUUUAUGCAAGUUGUAGCAGUGUGAGUUAGUCUCUUGAGGUUUUGAGAGCUUAAUCUCGUGGAAGCAUGAUAUUUUGUAGGGUUUGAGGAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010939916.1 |
|
2.5 | PREDICTED: Elaeis guineensis peptidyl-prolyl cis-trans isomerase CYP57 (LOC105057300), mRNA | NA | coding protein | psRNATarget | |||||||||
GBSV01043545.1 |
|
2.5 | TSA: Elaeis guineensis Unigene25386_All transcribed RNA sequence | NA | coding protein | psRNATarget |