ncRNA ID | novel_egu_miR471 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr5:24246022-24246117 [+] |
Reference genome | EG5 |
Source | SRR3042542 |
Length | 21 |
Mature sequence(if miRNA) | 76 - UGGGAGUCCGGGCGGAGCUGC - 96 |
Stem-loop(if miRNA) |
--   GGA      -              C    GGAG     -   -  G   GGU   GCCCGG CUCCCGUGGGAGUU GGGC    CUGUC CUG UA U   |||   |||||| |||||||||||||| ||||    ||||| ||| || C   UCG   CGGGCC GAGGGUGCUCUCGA CCCG    GGCGG GAC GU G CG   AGG      U              -    ---A     C   U  A |
Stem-loop sequence | GGUGGAGCCCGGCUCCCGUGGGAGUUCGGGCGGAGCUGUCCUGUAGUCGAUGUCAGCGGCGGAGCCCAGCUCUCGUGGGAGUCCGGGCGGAGCUGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GBSV01024151.1 |
|
2.0 | TSA: Elaeis guineensis Unigene5980_All transcribed RNA sequence | NA | coding protein | psRNATarget | |||||||||
XM_010928743.1 |
|
3.0 | PREDICTED: Elaeis guineensis uncharacterized LOC105049174 (LOC105049174), mRNA | NA | coding protein | psRNATarget |