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BaseInfo

ncRNA ID novel_egu_miR469
Species Elaeis guineensis
Class miRNA
Genome position Chr7:15847206-15847291 [+]
Reference genome EG5
Source SRR3042544
Length 24
Mature sequence(if miRNA) 63 - AUUGAAUGUAGAAGAAAUAAGGAU - 86
Stem-loop(if miRNA) --    U          U     A G   UAUU     A  AC
  UCUU UUUCUUUUAU UUUAA A AUA    UUUUU GA  A
  |||| |||||||||| ||||| | |||    ||||| ||  U
  GGAA AAAGAAGAUG AAGUU U UAU    AAAAA CU  C
UA    U          U     A G   UAUU     -  AC
Stem-loop sequence UCUUUUUUCUUUUAUUUUUAAAAGAUAUAUUUUUUUAGAACAUCCAUCAAAAAUUAUUAUGUAUUGAAUGUAGAAGAAAUAAGGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01019905.1
ncRNA:24   UAGGAAUAAAGAAGAUGUAAGUUA   1
  **=|||||||||||*||||||||*
targets:684   CCUCUUAUUUCUUCAACAUUCAAA   707

2.5 TSA: Elaeis guineensis Unigene1733_All transcribed RNA sequence NA coding protein psRNATarget