ncRNA ID | novel_egu_miR468 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr7:2711935-2712060 [-] |
Reference genome | EG5 |
Source | SRR3042544;SRR3042545 |
Length | 22 |
Mature sequence(if miRNA) | 1 - CGGGUGGGACGCGGAGGGGGCU - 22 |
Stem-loop(if miRNA) |
--           -   -  UA      G    C C   C    GC          G -    CG   CUCCUUUCGUG CCC CC  CGCCAU GGCU G GCG UGGG  CCAUGCGCUG A CUGG  A   ||||||||||| ||| ||  |||||| |||| | ||| ||||  |||||||||| | ||||  U   GGGGGAGGCGC GGG GG  GCGGUG CCGG C CGC ACUC  GGUGCGCGAC U GGCC  G UC           A   U  --      G    U A   U    UC          G C    UC |
Stem-loop sequence | CUCCUUUCGUGCCCCCUACGCCAUGGGCUCGCGCGCUGGGGCCCAUGCGCUGGACUGGCGAUGCUCCGGCUGCAGCGCGUGGCUCUCAUCGCACUGGCCGGUGGCGGGUGGGACGCGGAGGGGGCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GBSV01019954.1 |
|
0.0 | TSA: Elaeis guineensis Unigene1782_All transcribed RNA sequence | NA | coding protein | psRNATarget |