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BaseInfo

ncRNA ID	novel_egu_miR467
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr7:4465720-4465924 [-]
Reference genome	EG5
Source	SRR3042544
Length	24
Mature sequence(if miRNA)	182 - ACAUCUUGUGGCAUAUUAUGACUU - 205
Stem-loop(if miRNA)	--           -  U              CACA      ---   C       AGCCACAU  UA         AA                    U    A  U   ACAUCUUGUGG CA AUUAUGACUUCUUG    AUAGCA   AGU AUAAUUU        GA  UUAUAAGGA  GGAGGGGUAUUUUCAUUAUU AAAA UU G   ||||||||||| || ||||||||||||||    ||||||   ||| |||||||        ||  |||||||||  |||||||||||||||||||| |||| ||   UGUAGGAUAUC GU UAAUACUGAAGGAC    UAUUGU   UCA UAUUAAA        CU  AGUAUUUUU  UCUUCCCAUAAAAGUAGUAA UUUU AA A AU           A  U              ---A      AUU   A       -AGAAAAU  UC         -C                    C    A  U
Stem-loop sequence	ACAUCUUGUGGCAUAUUAUGACUUCUUGCACAAUAGCAAGUCAUAAUUUAGCCACAUGAUAUUAUAAGGAAAGGAGGGGUAUUUUCAUUAUUUAAAAAUUUGAUAAAUUUUCAAUGAUGAAAAUACCCUUCUCUUUUUAUGACUUCUAAAAGAAAAUUAUAACUUUAUGUUAUACAGGAAGUCAUAAUUUGACUAUAGGAUGUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_010907748.2	ncRNA:24   UUCAGUAUUAUACGGUGUUCUACA   1   ||||*||*|||||||||||||||* targets:780   AAGUAAUCAUAUGCCACAAGAUGC   803 Target Full Sequence	2.0	PREDICTED: Elaeis guineensis F-box protein SKIP16 (LOC105033093), mRNA	NA	coding protein	psRNATarget
JO100037.1	ncRNA:24   UUCAGUAUUAUACGGUGUUCUACA   1   *|||*||*|||||||||||||||* targets:757   UAGUAAUCAUAUGCCACAAGAUGC   780 Target Full Sequence	2.0	TSA: Elaeis guineensis isotig12810.Elguifruit mRNA sequence	NA	coding protein	psRNATarget
GBSV01015702.1	ncRNA:24   UUCAGUAUUAUACGGUGUUCUACA   1   *|||*||*|||||||||||||||* targets:829   UAGUAAUCAUAUGCCACAAGAUGC   852 Target Full Sequence	2.0	TSA: Elaeis guineensis CL5838.Contig1_All transcribed RNA sequence	NA	coding protein	psRNATarget
XM_010931952.2	ncRNA:24   UUCAGUAUUAUACGGUGUUCUACA   1   *|||*||*|||||||||||||||* targets:833   UAGUAAUCAUAUGCCACAAGAUGC   856 Target Full Sequence	2.0	PREDICTED: Elaeis guineensis F-box protein SKIP16 (LOC105051479), mRNA	NA	coding protein	psRNATarget
GBSV01015703.1	ncRNA:24   UUCAGUAUUAUACGGUGUUCUACA   1   *|||*||*|||||||||||||||* targets:916   UAGUAAUCAUAUGCCACAAGAUGC   939 Target Full Sequence	2.0	TSA: Elaeis guineensis CL5838.Contig2_All transcribed RNA sequence	NA	coding protein	psRNATarget