Search result

BaseInfo

ncRNA ID novel_egu_miR465
Species Elaeis guineensis
Class miRNA
Genome position Chr7:10472385-10472583 [-]
Reference genome EG5
Source SRR3042544
Length 24
Mature sequence(if miRNA) 1 - GUAGUUUUGAAGUAGUAGAUCAUA - 24
Stem-loop(if miRNA) --          UC G       G  A     U                GA    -  -       A           A       --AU   -      UUA
  UGAUCUACUA  U AAAAUUA UU UAUAU AAAAAUCAUAUGAUUU  AGAU CC CUAGUCU UGUAUCAAGUG UCAAAGA    AUA UUUAAU   A
  ||||||||||  | ||||||| || ||||| ||||||||||||||||  |||| || ||||||| ||||||||||| |||||||    ||| ||||||
  ACUAGAUGAU  A UUUUGAU AA AUAUG UUUUUAGUAUACUAAA  UCUA GG GAUUAGA ACGUAGUUUAU AGUUUUU    UGU AGAUUA   U
AU          GA G       G  C     U                --    U  A       C           C       AAUC   C      UUU
Stem-loop sequence UGAUCUACUAUCUGAAAAUUAGUUAUAUAUUAAAAAUCAUAUGAUUUGAAGAUCCCUAGUCUAUGUAUCAAGUGAUCAAAGAAUAUAUUUAAUUUAAUUUUAUUAGACUGUCUAAUUUUUGACUAUUUGAUGCACAGAUUAGAGGUAUCUAAAUCAUAUGAUUUUUUGUAUACAAGUAGUUUUGAAGUAGUAGAUCAUA