Search result

BaseInfo

ncRNA ID	novel_egu_miR464
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr7:38411481-38411531 [-]
Reference genome	EG5
Source	SRR3042544
Length	21
Mature sequence(if miRNA)	31 - CUGUCAAGCAGAUGGAACGUU - 51
Stem-loop(if miRNA)	--C      G  G    --       U    UGUCAA CA AUGG  AACGUUA U    |||||| || ||||  |||||||    ACAGUU GU UAUC  UUGUAAU U GAA      -  G    AU       U
Stem-loop sequence	CUGUCAAGCAGAUGGAACGUUAUUUUUAAUGUUUACUAUGUGUUGACAAAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
GBSV01008806.1	ncRNA:21   UUGCAAGGUAGACGAACUGUC   1   ==|*||||||||||||*|||| targets:1414   GGCCUUCCAUCUGCUUUACAG   1434 Target Full Sequence	2.5	TSA: Elaeis guineensis CL3061.Contig2_All transcribed RNA sequence	NA	coding protein	psRNATarget
XM_010938668.2	ncRNA:21   UUGCAAGGUAGACGAACUGUC   1   ==|*||||||||||||*|||| targets:1556   GGCCUUCCAUCUGCUUUACAG   1576 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis uncharacterized LOC105056461 (LOC105056461), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_010938666.2	ncRNA:21   UUGCAAGGUAGACGAACUGUC   1   ==|*||||||||||||*|||| targets:1557   GGCCUUCCAUCUGCUUUACAG   1577 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis uncharacterized LOC105056461 (LOC105056461), transcript variant X1, mRNA	NA	coding protein	psRNATarget
GBSV01008805.1	ncRNA:21   UUGCAAGGUAGACGAACUGUC   1   ==|*||||||||||||*|||| targets:1597   GGCCUUCCAUCUGCUUUACAG   1617 Target Full Sequence	2.5	TSA: Elaeis guineensis CL3061.Contig1_All transcribed RNA sequence	NA	coding protein	psRNATarget