ncRNA ID | ath-miRf10895-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 23 |
Mature sequence(if miRNA) | NA - UACUCGACCCCCUGGUCGAGUGA - NA |
Stem-loop(if miRNA) |
GAACA          CCCU           --UU     CCAUUCUACCCAUC    ------------------     CCCAGGUCGAGUAACUACAGCUCAGGCCACUUG      AUACUCGACC    GGUCGAGUGAC    UGGAG              UACU                  CGACC                                 A      ||||||||||    |||||||||||    |||||              ||||                  |||||      UAUGAGCUGG    CCAGCUCAUUG    ACCUC              CCGG                  ACCGU                                 U -CUAC          UCCC           CACC     ---------ACUUG    CUCACACCAGUCCACCAC     UUCACUAUGCGAUGGUCCCCCAGCUCAUUACAG |
Stem-loop sequence | GAACAAUACUCGACCCCCUGGUCGAGUGACUUUGGAGCCAUUCUACCCAUCUACUCGACCCCCAGGUCGAGUAACUACAGCUCAGGCCACUUGAUGACAUUACUCGACCCCCUGGUAGCGUAUCACUUUGCCACACCACCUGACCACACUCGGCCGUUCACUCCACCACGUUACUCGACCCCCUGGUCGAGUAUCAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EF183311.1 |
|
1.0 | Arabidopsis thaliana clone asmbl_5275 unknown mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EF183005.1 |
|
2.5 | Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence | NA | coding protein | psRNATarget |