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BaseInfo

ncRNA ID ath-miRf10895-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - UACUCGACCCCCUGGUCGAGUGA - NA
Stem-loop(if miRNA) GAACA          CCCU           --UU     CCAUUCUACCCAUC    ------------------     CCCAGGUCGAGUAACUACAGCUCAGGCCACUUG
     AUACUCGACC    GGUCGAGUGAC    UGGAG              UACU                  CGACC                                 A
     ||||||||||    |||||||||||    |||||              ||||                  |||||
     UAUGAGCUGG    CCAGCUCAUUG    ACCUC              CCGG                  ACCGU                                 U
-CUAC          UCCC           CACC     ---------ACUUG    CUCACACCAGUCCACCAC     UUCACUAUGCGAUGGUCCCCCAGCUCAUUACAG
Stem-loop sequence GAACAAUACUCGACCCCCUGGUCGAGUGACUUUGGAGCCAUUCUACCCAUCUACUCGACCCCCAGGUCGAGUAACUACAGCUCAGGCCACUUGAUGACAUUACUCGACCCCCUGGUAGCGUAUCACUUUGCCACACCACCUGACCACACUCGGCCGUUCACUCCACCACGUUACUCGACCCCCUGGUCGAGUAUCAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EF183311.1
ncRNA:23   AGUGAGCUGGUCCCCCAGCUCAU   1
  *=||||||||||||||||||||=
targets:435   CUACUCGACCAGGGGGUCGAGUG   457

1.0 Arabidopsis thaliana clone asmbl_5275 unknown mRNA sequence NA coding protein psRNATarget
EF183005.1
ncRNA:23   AGUGAGCUGGUCCCCCAGCUCAU   1
  *||||||||||*||||||||||=
targets:1923   GCACUCGACCACGGGGUCGAGUG   1945

2.5 Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence NA coding protein psRNATarget