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BaseInfo

ncRNA ID	novel_egu_miR461
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr6:34522937-34523118 [+]
Reference genome	EG5
Source	SRR3042544
Length	21
Mature sequence(if miRNA)	1 - UCUUUCGAGCGAAAGAACGAU - 21
Stem-loop(if miRNA)	--       AG       AC    CACC  C      G  - A   G          GCGAAUUGG        ---      ----  ---   UAU  AU   UCUUUCG  CGAAAGA  GAUU    CU CUUUUG CG C UCG CCGUUGGAUC         UUGCUUCG   AGAUCU    GC   GCA   GG  G   |||||||  |||||||  ||||    || |||||| || | ||| ||||||||||         ||||||||   ||||||    ||   |||   ||  G   AGAAAGC  GCUUUUU  CUAG    GA GAAAGC GC G AGC GGCAGCCUAG         AGCGAGGC   UCUAGA    CG   CGU   CC  A AU       GA       -A    -CUA  A      -  U C   G          ---------        GUA      GUUU  UUA   UUU  GU
Stem-loop sequence	UCUUUCGAGCGAAAGAACGAUUCACCCUCCUUUUGGCGCAUCGGCCGUUGGAUCGCGAAUUGGUUGCUUCGAGAUCUGCGCAUAUGGAUGGAUGCCUUUUGCAUUGCUUUGAGAUCUAUGCGGAGCGAGAUCCGACGGGCGACGUCGCGAAAGAAGAUCGAUCAUUUUUCGAGCGAAAGAUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
GBSV01048071.1	ncRNA:21   UAGCAAGAAAGCGAGCUUUCU   1   |||*|||||||*||||||||| targets:201   AUCAUUCUUUCACUCGAAAGA   221 Target Full Sequence	2.5	TSA: Elaeis guineensis Unigene29912_All transcribed RNA sequence	NA	coding protein	psRNATarget
GBSV01047028.1	ncRNA:21   UAGCAAGAAAGCGAGCUUUCU   1   |||*|||||||||*||||||| targets:62   AUCAUUCUUUCGCGCGAAAGA   82 Target Full Sequence	2.5	TSA: Elaeis guineensis Unigene28869_All transcribed RNA sequence	NA	coding protein	psRNATarget
XM_010931701.2	ncRNA:21   UAGCAAGAAAGCGAGCUUUCU   1   |||*|||||||||*||||||| targets:23   AUCAUUCUUUCGCGCGAAAGA   43 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis phosphopantothenoylcysteine decarboxylase (LOC105051327), transcript variant X1, mRNA	NA	coding protein	psRNATarget
GBSV01017873.1	ncRNA:21   UAGCAAGAAAGCGAGCUUUCU   1   |||*|||||||||*||||||| targets:1   AUCAUUCUUUCGCGCGAAAGA   21 Target Full Sequence	2.5	TSA: Elaeis guineensis CL6821.Contig1_All transcribed RNA sequence	NA	coding protein	psRNATarget
XM_019852951.1	ncRNA:21   UAGCAAGAAAGCGAGCUUUCU   1   |||*|||||||||*||||||| targets:95   AUCAUUCUUUCGCGCGAAAGA   115 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis phosphopantothenoylcysteine decarboxylase (LOC105051327), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_019850299.1	ncRNA:21   UAGCAAGAAAGCGAGCUUUCU   1   |||*|||||||||*||||||| targets:270   AUCAUUCUUUCGCGCGAAAGA   290 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis oxysterol-binding protein-related protein 3A (LOC105044388), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_019847654.1	ncRNA:21   UAGCAAGAAAGCGAGCUUUCU   1   |||*|||||||||*||||||| targets:684   AUCAUUCUUUCGCGCGAAAGA   704 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis probable carboxylesterase 2 (LOC109505241), partial mRNA	NA	coding protein	psRNATarget
XM_010922264.2	ncRNA:21   UAGCAAGAAAGCGAGCUUUCU   1   |||*|||||||||*||||||| targets:266   AUCAUUCUUUCGCGCGAAAGA   286 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis oxysterol-binding protein-related protein 3A (LOC105044388), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_010937713.2	ncRNA:21   UAGCAAGAAAGCGAGCUUUCU   1   |||*|||||||||*||||||| targets:165   AUCAUUCUUUCGCGCGAAAGA   185 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis uncharacterized LOC105055750 (LOC105055750), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_010907634.2	ncRNA:21   UAGCAAGAAAGCGAGCUUUCU   1   |||*|||||||||*||||||| targets:4515   AUCAUUCUUUCGCACGAAAGA   4535 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis uncharacterized LOC105033009 (LOC105033009), mRNA	NA	coding protein	psRNATarget