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BaseInfo

ncRNA ID novel_egu_miR454
Species Elaeis guineensis
Class miRNA
Genome position Chr10:8866359-8866444 [-]
Reference genome EG5
Source SRR3042542
Length 21
Mature sequence(if miRNA) 1 - AUCUGAUCAGGAUUCGAGUUG - 21
Stem-loop(if miRNA) --AUC      -G    G     GG          GA     UG
     UGAAUU  GAUC AGAUU  GAUCUGGGUC  GAUCU  A
     ||||||  |||| |||||  ||||||||||  |||||
     GCUUAG  CUAG UCUAG  CUAGACCUAG  UUAGG  U
GUUGA      GA    -     AG          AG     CU
Stem-loop sequence AUCUGAAUUGGAUCGAGAUUGGGAUCUGGGUCGAGAUCUUGAUUCGGAUUGAGAUCCAGAUCGAGAUCUGAUCAGGAUUCGAGUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01036436.1
ncRNA:21   GUUGAGCUUAGGACUAGUCUA   1
  |||||**|||||||||||||*
targets:173   CAACUAAAAUCCUGAUCAGAA   193

3.0 TSA: Elaeis guineensis Unigene18271_All transcribed RNA sequence NA coding protein psRNATarget