ncRNA ID | novel_egu_miR454 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr10:8866359-8866444 [-] |
Reference genome | EG5 |
Source | SRR3042542 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AUCUGAUCAGGAUUCGAGUUG - 21 |
Stem-loop(if miRNA) |
--AUC      -G    G     GG          GA     UG      UGAAUU  GAUC AGAUU  GAUCUGGGUC  GAUCU  A      ||||||  |||| |||||  ||||||||||  |||||      GCUUAG  CUAG UCUAG  CUAGACCUAG  UUAGG  U GUUGA      GA    -     AG          AG     CU |
Stem-loop sequence | AUCUGAAUUGGAUCGAGAUUGGGAUCUGGGUCGAGAUCUUGAUUCGGAUUGAGAUCCAGAUCGAGAUCUGAUCAGGAUUCGAGUUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GBSV01036436.1 |
|
3.0 | TSA: Elaeis guineensis Unigene18271_All transcribed RNA sequence | NA | coding protein | psRNATarget |