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BaseInfo

ncRNA ID	ath-miRf10894-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - AUACUCGACCACGAGGUCGAGUG - NA
Stem-loop(if miRNA)	---           ACGA   C      UC U  GAA UG  -GA   CUU          A GAUGAU   GAUACUCGACC    GGU GAGUGG  G GU   G  AU   GGC   CUACUCGACC G ||||||   |||||||||||    ||| ||||||  | ||   |  ||   |||   |||||||||| CUGCUA   UUGUGAGCUGG    CCA CUCAUC  C CG   C  UG   UUG   GGUGAGCUGG G       UAG           GGGA   A      UA -  AAG GU  AAG   UUU          G
Stem-loop sequence	GAUGAUGAUACUCGACCACGAGGUCGAGUGGUCGUGUGAAGUGAUGAGGCCUUCUACUCGACCAGGGGGUCGAGUGGUUUGUUGAAGUUGCGAAGCCAUCUACUCAACCAGGGGGUCGAGUGUUGAUAUCGUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EF183311.1	ncRNA:23   GUGAGCUGGAGCACCAGCUCAUA   1   =||||||*||||||||||||||| targets:579   UACUCGAGCUCGUGGUCGAGUAU   601 Target Full Sequence	1.0	Arabidopsis thaliana clone asmbl_5275 unknown mRNA sequence	NA	coding protein	psRNATarget
AY231407.1	ncRNA:23   GUGAGCUGGAGCACCAGCUCAUA   1   |||||||||*||||||||||||* targets:490   CACUCGACCCCGUGGUCGAGUAG   512 Target Full Sequence	2.0	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:23   GUGAGCUGGAGCACCAGCUCAUA   1   |||||||||*|||||||||||=| targets:1210   CACUCGACCCCGUGGUCGAGUGU   1232 Target Full Sequence	2.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
AY231407.1	ncRNA:23   GUGAGCUGGAGCACCAGCUCAUA   1   =||*|||||*|*||||||||||| targets:584   UACYCGACCCCCUGGUCGAGUAU   606 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
BT015478.1	ncRNA:23   GUGAGCUGGAGCACCAGCUCAUA   1   |||||||||*|*||||||||||| targets:231   CACUCGACCCCCUGGUCGAGUAU   253 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:23   GUGAGCUGGAGCACCAGCUCAUA   1   =||||||||*|*||||||||||| targets:182   UACUCGACCCCCUGGUCGAGUAU   204 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:23   GUGAGCUGGAGCACCAGCUCAUA   1   |||||||||*|*||||||||||| targets:231   CACUCGACCCCCUGGUCGAGUAU   253 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:23   GUGAGCUGGAGCACCAGCUCAUA   1   =||||||||*|*||||||||||| targets:182   UACUCGACCCCCUGGUCGAGUAU   204 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT025674.1	ncRNA:23   GUGAGCUGGAGCACCAGCUCAUA   1   =||||||||*|*||||||||||| targets:309   UACUCGACCCCCUGGUCGAGUAU   331 Target Full Sequence	2.5	Arabidopsis thaliana	NA	coding protein	psRNATarget
AY231407.1	ncRNA:23   GUGAGCUGGAGCACCAGCUCAUA   1   =||||*|||*||||||||||||* targets:643   UACUCAACCACGUGGUCGAGUAC   665 Target Full Sequence	3.0	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
EF183192.1	ncRNA:23   GUGAGCUGGAGCACCAGCUCAUA   1   ||*||*|||*||||||||||||* targets:170   CAGUCAACCCCGUGGUCGAGUAG   192 Target Full Sequence	3.0	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:23   GUGAGCUGGAGCACCAGCUCAUA   1   ||*||*|||*||||||||||||* targets:545   CAGUCAACCCCGUGGUCGAGUAG   567 Target Full Sequence	3.0	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:23   GUGAGCUGGAGCACCAGCUCAUA   1   ||*||*|||*||||||||||||* targets:545   CAGUCAACCCCGUGGUCGAGUAG   567 Target Full Sequence	3.0	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget