ncRNA ID | novel_egu_miR446 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr3:17278947-17279101 [-] |
Reference genome | EG5 |
Source | SRR3042542;SRR3042544;SRR3042545;SRR3042547;SRR3042548 |
Length | 24 |
Mature sequence(if miRNA) | 132 - AUACAUACUGUAAGUUUUUUUGAU - 155 |
Stem-loop(if miRNA) |
--            A          U   A      CAAUGAG     AUA -             UUAAUA       U   AUACAUACUGUA GUUUUUUUGA ACA ACUUAG       CUAAU   C AUCUUCAAAUAAA      CAUAUUU U   |||||||||||| |||||||||| ||| ||||||       |||||   | |||||||||||||      |||||||   UAUGUAUGACGU CGAAAAAAUU UGU UGGGUU       GGUUA   G UAGAGGUUUAUUU      GUAUAGG U AC            C          C   G      AUCAGUA     -GG A             ---UUC       A |
Stem-loop sequence | AUACAUACUGUAAGUUUUUUUGAUACAAACUUAGCAAUGAGCUAAUAUACAUCUUCAAAUAAAUUAAUACAUAUUUUUUAGGAUAUGCUUUUUAUUUGGAGAUAGGGAUUGGAUGACUAUUGGGUGUGUCUUAAAAAAGCCUGCAGUAUGUAUCA |