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BaseInfo

ncRNA ID	novel_egu_miR445
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr5:42903642-42903710 [-]
Reference genome	EG5
Source	SRR3042542;SRR3042547;SRR3042548;SRR5189964
Length	21
Mature sequence(if miRNA)	49 - ACUCUCCCUCAAGGGCUUCUC - 69
Stem-loop(if miRNA)	--     C              CC   C    GCU   ACUCU CCUCAAGGGCUUCU  CCU ACAU   U   ||||| ||||||||||||||  ||| ||||   UGAGA GGGGUUCCCGAAGA  GGA UGUG   G AG     U              CU   -    AUU
Stem-loop sequence	ACUCUCCCUCAAGGGCUUCUCCCCUCACAUGCUUGUUAGUGUAGGUCAGAAGCCCUUGGGGUAGAGUGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_010921636.2	ncRNA:21   CUCUUCGGGAACUCCCUCUCA   1   ||||||||=|||||||||||| targets:465   GAGAAGCCUUUGAGGGAGAGU   485 Target Full Sequence	1.5	PREDICTED: Elaeis guineensis replication factor C subunit 2-like (LOC105043909), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_010921635.2	ncRNA:21   CUCUUCGGGAACUCCCUCUCA   1   ||||||||=|||||||||||| targets:465   GAGAAGCCUUUGAGGGAGAGU   485 Target Full Sequence	1.5	PREDICTED: Elaeis guineensis replication factor C subunit 2-like (LOC105043909), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_010921634.2	ncRNA:21   CUCUUCGGGAACUCCCUCUCA   1   ||||||||=|||||||||||| targets:465   GAGAAGCCUUUGAGGGAGAGU   485 Target Full Sequence	1.5	PREDICTED: Elaeis guineensis replication factor C subunit 2-like (LOC105043909), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_010930742.2	ncRNA:21   CUCUUCGGGAACUCCCUCUCA   1   ||||||*=||||||||||||| targets:924   GAGAAGAUCUUGAGGGAGAGU   944 Target Full Sequence	2.0	PREDICTED: Elaeis guineensis pentatricopeptide repeat-containing protein At5g65560-like (LOC105050646), mRNA	NA	coding protein	psRNATarget
XM_010934410.2	ncRNA:21   CUCUUCGGGAACUCCCUCUCA   1   *=||||||=|||||||||||* targets:733   UGGAAGCCUUUGAGGGAGAGA   753 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis DELLA protein RGL1-like (LOC105053310), mRNA	NA	coding protein	psRNATarget
GBSV01015152.1	ncRNA:21   CUCUUCGGGAACUCCCUCUCA   1   **|||||||||||*||||||* targets:244   UUGAAGCCCUUGACGGAGAGG   264 Target Full Sequence	2.5	TSA: Elaeis guineensis CL5602.Contig2_All transcribed RNA sequence	NA	coding protein	psRNATarget