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BaseInfo

ncRNA ID novel_egu_miR444
Species Elaeis guineensis
Class miRNA
Genome position Chr3:23525057-23525252 [-]
Reference genome EG5
Source SRR3042542;SRR3042547;SRR3042548
Length 24
Mature sequence(if miRNA) 1 - AAGCAGUUUUGAGAUAGUAGAUCA - 24
Stem-loop(if miRNA) --     G  C         A              U            A    UC             C     AUC       ACAUCUAAUUUAAU
  AUCUA UA UUCAAAAUU CUUGUAUAUAAAAA UUAUAUGAUUUG AGAC  CUAGCCUAUGCAU AAGUA   CAAAAAU              U
  ||||| || ||||||||| |||||||||||||| |||||||||||| ||||  ||||||||||||| |||||   |||||||              U
  UAGAU AU GAGUUUUGA GAACGUGUGUUUUU AGUAUACUAAAC UCUG  GAUUGGAUACGUA UUCAU   GUUUUUA              U
AC     G  A         C              U            C    GU             A     -CA       AUCUAUCGGACUUA
Stem-loop sequence AUCUAGUACUUCAAAAUUACUUGUAUAUAAAAAUUUAUAUGAUUUGAAGACUCCUAGCCUAUGCAUCAAGUAAUCCAAAAAUACAUCUAAUUUAAUUUUAUUCAGGCUAUCUAAUUUUUGACUACUUAAUGCAUAGGUUAGUGGUCUCCAAAUCAUAUGAUUUUUUGUGUGCAAGCAGUUUUGAGAUAGUAGAUCA