ncRNA ID | novel_egu_miR443 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr11:9213351-9213432 [+] |
Reference genome | EG5 |
Source | SRR3042542;SRR3042545 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACUUCAUGUGAGAGAGAAUUGGGU - 24 |
Stem-loop(if miRNA) |
--      -       -       GGGUG        UU    GU   ACUUCA UGUGAGA GAGAAUU     UACAAGGG  GAGG  G   |||||| ||||||| |||||||     ||||||||  ||||   UGAAGU AUACUUU CUUUUAA     AUGUUCUC  CUCU  A UU      G       U       ----A        --    GG |
Stem-loop sequence | ACUUCAUGUGAGAGAGAAUUGGGUGUACAAGGGUUGAGGGUGAGGUCUCCUCUUGUAAAAUUUUCUUUUCAUAGUGAAGUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GBSV01017255.1 |
|
1.5 | TSA: Elaeis guineensis CL6532.Contig1_All transcribed RNA sequence | NA | coding protein | psRNATarget |