ncRNA ID | novel_egu_miR430 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr2:19814072-19814149 [+] |
Reference genome | EG5 |
Source | SRR3042542 |
Length | 24 |
Mature sequence(if miRNA) | 55 - AGGAUCUGAAAGAAGUUAGAGGGC - 78 |
Stem-loop(if miRNA) |
--         GGG   U        GUUC   -   U A   CUUCUAAUU   UUC AGAUUCUG    GAA UGC C C   |||||||||   ||| ||||||||    ||| ||| |   GGAGAUUGA   AAG UCUAGGAC    CUU ACG G U CG         AGA   -        AUAU   C   U U |
Stem-loop sequence | CUUCUAAUUGGGUUCUAGAUUCUGGUUCGAAUGCUCACUUGUGCACUUCUAUACAGGAUCUGAAAGAAGUUAGAGGGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_019852392.1 |
|
2.5 | PREDICTED: Elaeis guineensis protein SMG7-like (LOC105049426), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_010929061.2 |
|
2.5 | PREDICTED: Elaeis guineensis protein SMG7-like (LOC105049426), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_019852393.1 |
|
2.5 | PREDICTED: Elaeis guineensis protein SMG7-like (LOC105049426), transcript variant X3, mRNA | NA | coding protein | psRNATarget |