Search result

BaseInfo

ncRNA ID	novel_egu_miR428
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr4:55549519-55549600 [-]
Reference genome	EG5
Source	SRR3042542
Length	24
Mature sequence(if miRNA)	1 - AUAUAUAUUGUUCAGAAUGUUAUA - 24
Stem-loop(if miRNA)	--UAU     G     U         --------------     GAA      UAUUC GAACG UAUAUAUAU              UUAUA   A      ||||| ||||| |||||||||              |||||      GUAAG CUUGU AUAUAUAUA              AAUAU   G AUAUU     A     U         UUGAAAGAUUAUAG     AUU
Stem-loop sequence	UAUUAUUCGGAACGUUAUAUAUAUUUAUAGAAAGUUAUAUAAGAUAUUAGAAAGUUAUAUAUAUAUUGUUCAGAAUGUUAUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_010925256.2	ncRNA:24   AUAUUGUAAG-ACUUGUUAUAUAUA   1   *=||*|||*|-|||||||||||||| targets:1122   AGUACCAUCCCUGAACAAUAUAUAU   1146 Target Full Sequence	3.0	PREDICTED: Elaeis guineensis transcription factor bHLH113-like (LOC105046616), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_010925255.2	ncRNA:24   AUAUUGUAAG-ACUUGUUAUAUAUA   1   *=||*|||*|-|||||||||||||| targets:1188   AGUACCAUCCCUGAACAAUAUAUAU   1212 Target Full Sequence	3.0	PREDICTED: Elaeis guineensis transcription factor bHLH113-like (LOC105046616), transcript variant X1, mRNA	NA	coding protein	psRNATarget