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BaseInfo

ncRNA ID novel_egu_miR427
Species Elaeis guineensis
Class miRNA
Genome position Chr11:7625969-7626049 [+]
Reference genome EG5
Source SRR3042542
Length 24
Mature sequence(if miRNA) 1 - AAACAAUAUGUAAGCAGCUGAGAG - 24
Stem-loop(if miRNA) --    AAU       C       AGA   ACUAAGGAUGG
  AAAC   AUGUAAG AGCUGAG   GAA           G
  ||||   ||||||| |||||||   |||           U
  UUUG   UAUGUUC UCGGCUU   GAG           U
AG    GAU       -       -AU   UAGACUUGGAC
Stem-loop sequence AAACAAUAUGUAAGCAGCUGAGAGAGAAACUAAGGAUGGGUUCAGGUUCAGAUGAGUAUUCGGCUCUUGUAUUAGGUUUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010939747.2
ncRNA:24   GAGAGUCGACGAAUGUAUAACAAA   1
  *|*|=|||||=|||*|||||||||
targets:1365   AUAUUAGCUGUUUAAAUAUUGUUU   1388

2.5 PREDICTED: Elaeis guineensis protein CDC73 homolog (LOC105057225), mRNA NA coding protein psRNATarget