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BaseInfo

ncRNA ID novel_egu_miR426
Species Elaeis guineensis
Class miRNA
Genome position Chr2:10959557-10959627 [-]
Reference genome EG5
Source SRR3042542;SRR3042545;SRR3042547;SRR3042548
Length 21
Mature sequence(if miRNA) 51 - AGGUGCAAGUGAACUGGGGCA - 71
Stem-loop(if miRNA) --       A             A   -C   A CA
  AGGUGCA GUGAACUGGGGCA AUC  CGG G  U
  ||||||| ||||||||||||| |||  ||| |
  UCCACGU CACUUGGCCCCGU UAG  GCC C  A
GG       C             G   AU   A CU
Stem-loop sequence AGGUGCAAGUGAACUGGGGCAAAUCCCGGAGCAUAUCCACCGUAGAUGUGCCCCGGUUCACCUGCACCUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010918343.2
ncRNA:21   ACGGGGUCAAGUGAACGUGGA   1
  ||||=|=||||||||||||||
targets:128   UGCCUCGGUUCACUUGCACCU   148

2.0 PREDICTED: Elaeis guineensis probable carboxylesterase 2 (LOC105041381), mRNA NA coding protein psRNATarget
GBSV01023548.1
ncRNA:21   ACGGGGUCAAGUGAACGUGGA   1
  |||||==||||||||||||||
targets:150   UGCCCUGGUUCACUUGCACCU   170

2.0 TSA: Elaeis guineensis Unigene5377_All transcribed RNA sequence NA coding protein psRNATarget
XM_010940818.2
ncRNA:21   ACGGGGUCAAGUGAACGUGGA   1
  |||||==||||||||||||||
targets:590   UGCCCUGGUUCACUUGCACCU   610

2.0 PREDICTED: Elaeis guineensis elongator complex protein 5 (LOC105058042), mRNA NA coding protein psRNATarget
XM_010929220.2
ncRNA:21   ACGGGGUCAAGUGAACGUGGA   1
  ||||||=|||||||||*||||
targets:18   UGCCCCGGUUCACUUGGACCU   38

2.5 PREDICTED: Elaeis guineensis calmodulin-binding protein 60 E (LOC105049544), transcript variant X1, mRNA NA coding protein psRNATarget
XM_010913616.2
ncRNA:21   ACGGGGUCAAGUGAACGUGGA   1
  ||||||=||||||*|||||||
targets:22   UGCCCCGGUUCACCUGCACCU   42

2.5 PREDICTED: Elaeis guineensis putative disease resistance protein RGA4 (LOC105037974), mRNA NA coding protein psRNATarget