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BaseInfo

ncRNA ID novel_egu_miR424
Species Elaeis guineensis
Class miRNA
Genome position Chr2:42365810-42365992 [-]
Reference genome EG5
Source SRR3042542
Length 24
Mature sequence(if miRNA) 1 - AUGCUAAAGAGACGGAGAUACCCA - 24
Stem-loop(if miRNA) --         A               CA          A    C             GACA GC   ACAUAGUAUCAUCAUAUUAUUAGAA
  GGUAUCUUC UCUCUUUGGCAUCAG  UCUUGGGUAU UUGC AUGACUGUUGUUU    G  AUU                         U
  ||||||||| |||||||||||||||  |||||||||| |||| |||||||||||||    |  |||
  CCAUAGAGG AGAGAAAUCGUAGUC  AGAACCCGUG GAUG UACUGAUAACAAA    G  AUA                         A
AC         C               AC          G    U             -GGA --   AUAAAGAUUCGUAAGAGAUGGAUAA
Stem-loop sequence GGUAUCUUCAUCUCUUUGGCAUCAGCAUCUUGGGUAUAUUGCCAUGACUGUUGUUUGACAGGCAUUACAUAGUAUCAUCAUAUUAUUAGAAUAAAUAGGUAGAGAAUGCUUAGAAAUAAUAGAGGAAACAAUAGUCAUUGUAGGGUGCCCAAGACACUGAUGCUAAAGAGACGGAGAUACCCA