ncRNA ID | novel_egu_miR420 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr2:62581116-62581205 [+] |
Reference genome | EG5 |
Source | SRR3042542 |
Length | 21 |
Mature sequence(if miRNA) | 70 - UGGGAGUCCGGGCGGAGCUGC - 90 |
Stem-loop(if miRNA) |
-A   GGA      -      UA    U      GGAG  GUG   AU   GGU   GCCCGG CUCCCG  GGAG CCGGGC    CU   CCG  G   |||   |||||| ||||||  |||| ||||||    ||   |||   UCG   CGGGCC GAGGGU  CCUC GGCCCG    GG   GGC  U CG   AGG      U      GC    -      ---A  --A   GU |
Stem-loop sequence | AGGUGGAGCCCGGCUCCCGUAGGAGUCCGGGCGGAGCUGUGCCGAUGUUGCGGAGGAGCCCGGCUCCCGUGGGAGUCCGGGCGGAGCUGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GBSV01024151.1 |
|
2.0 | TSA: Elaeis guineensis Unigene5980_All transcribed RNA sequence | NA | coding protein | psRNATarget | |||||||||
XM_010928743.1 |
|
3.0 | PREDICTED: Elaeis guineensis uncharacterized LOC105049174 (LOC105049174), mRNA | NA | coding protein | psRNATarget |