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BaseInfo

ncRNA ID novel_egu_miR418
Species Elaeis guineensis
Class miRNA
Genome position Chr2:48931034-48931235 [+]
Reference genome EG5
Source SRR3042542
Length 24
Mature sequence(if miRNA) 179 - AUAAUUUCAACGUAGGAUGUCAUA - 202
Stem-loop(if miRNA) --          UA  A    A            AUAAA               C              AGAA  A   --      C        A      U
  UGACAUCUUG  UU AAAU AUGACUUUCUGU     AUGUCAUAAUUUUUU ACAGGAUGUCAUAA    GA GGA  UGUUUU AUUAUUGA AAAUUU A
  ||||||||||  || |||| ||||||||||||     ||||||||||||||| ||||||||||||||    || |||  |||||| |||||||| |||||| U
  ACUGUAGGAU  AA UUUA UACUGAAGGACG     UACAGUAUUAGAAAA UGUCUUAUAGUAUU    CU CCU  AUAAAA UAGUAACU UUUAAA A
AU          GC  C    A            ----C               -              AAAA  A   UU      A        A      U
Stem-loop sequence UGACAUCUUGUAUUAAAAUAAUGACUUUCUGUAUAAAAUGUCAUAAUUUUUUCACAGGAUGUCAUAAAGAAGAAGGAUGUUUUCAUUAUUGAAAAAUUUUAUAUAAAUUUAUCAAUGAUAAAAAUAUUUCCAUCAAAAUUAUGAUAUUCUGUAAAAGAUUAUGACAUCGCAGGAAGUCAUAAUUUCAACGUAGGAUGUCAUA