ncRNA ID | novel_egu_miR418 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr2:48931034-48931235 [+] |
Reference genome | EG5 |
Source | SRR3042542 |
Length | 24 |
Mature sequence(if miRNA) | 179 - AUAAUUUCAACGUAGGAUGUCAUA - 202 |
Stem-loop(if miRNA) |
--          UA  A    A            AUAAA               C              AGAA  A   --      C        A      U   UGACAUCUUG  UU AAAU AUGACUUUCUGU     AUGUCAUAAUUUUUU ACAGGAUGUCAUAA    GA GGA  UGUUUU AUUAUUGA AAAUUU A   ||||||||||  || |||| ||||||||||||     ||||||||||||||| ||||||||||||||    || |||  |||||| |||||||| |||||| U   ACUGUAGGAU  AA UUUA UACUGAAGGACG     UACAGUAUUAGAAAA UGUCUUAUAGUAUU    CU CCU  AUAAAA UAGUAACU UUUAAA A AU          GC  C    A            ----C               -              AAAA  A   UU      A        A      U |
Stem-loop sequence | UGACAUCUUGUAUUAAAAUAAUGACUUUCUGUAUAAAAUGUCAUAAUUUUUUCACAGGAUGUCAUAAAGAAGAAGGAUGUUUUCAUUAUUGAAAAAUUUUAUAUAAAUUUAUCAAUGAUAAAAAUAUUUCCAUCAAAAUUAUGAUAUUCUGUAAAAGAUUAUGACAUCGCAGGAAGUCAUAAUUUCAACGUAGGAUGUCAUA |