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BaseInfo

ncRNA ID	novel_egu_miR417
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr1:47079592-47079695 [+]
Reference genome	EG5
Source	SRR3042542
Length	24
Mature sequence(if miRNA)	81 - AAGAGGGGAUGAUUGGUAGAAGGC - 104
Stem-loop(if miRNA)	--     U  -U       -      CAAGA  C      GU   U UU   UC   CUUCU CC  UCAUCUC UCUUGC     GA UUAUGG  UAU G  GGG  A   ||||| ||  ||||||| ||||||     || ||||||  ||| |  |||  G   GAAGA GG  AGUAGGG AGAACG     CU AGUAUC  AUA C  CCC  A CG     U  UU       G      --UGA  U      UG   - UU   UA
Stem-loop sequence	CUUCUUCCUUCAUCUCUCUUGCCAAGAGACUUAUGGGUUAUUGUUGGGUCAGAAUCCCUUCAUAGUCUAUGAUUCAGUGCAAGAGGGGAUGAUUGGUAGAAGGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_010941454.2	ncRNA:24   CGGAAGAUGGUUAGUAGGGGAGAA   1   *|||*|||||=||||||||||||* targets:60   UCCUCCUACCGAUCAUCCCCUCUC   83 Target Full Sequence	2.0	PREDICTED: Elaeis guineensis uncharacterized protein slp1-like (LOC105058503), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_010941457.2	ncRNA:24   CGGAAGAUGGUUAGUAGGGGAGAA   1   *|||*|||||=||||||||||||* targets:62   UCCUCCUACCGAUCAUCCCCUCUC   85 Target Full Sequence	2.0	PREDICTED: Elaeis guineensis uncharacterized protein slp1-like (LOC105058503), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_010941455.2	ncRNA:24   CGGAAGAUGGUUAGUAGGGGAGAA   1   *|||*|||||=||||||||||||* targets:61   UCCUCCUACCGAUCAUCCCCUCUC   84 Target Full Sequence	2.0	PREDICTED: Elaeis guineensis uncharacterized protein slp1-like (LOC105058503), transcript variant X2, mRNA	NA	coding protein	psRNATarget
GBSV01036953.1	ncRNA:24   CGGAAGAUGGUUAGUAGGGGAGAA   1   *|||*|||||=||||||||||||* targets:36   UCCUCCUACCGAUCAUCCCCUCUC   59 Target Full Sequence	2.0	TSA: Elaeis guineensis Unigene18789_All transcribed RNA sequence	NA	coding protein	psRNATarget